Details for gene set NCI_GLYPICAN PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	set02_BT_ATM_minus_versus_ATM_plus
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	NCI_GLYPICAN PATHWAY
Enrichment Score (ES)	0.41842264
Normalized Enrichment Score (NES)	2.0638733
Nominal p-value	0.0
FDR q-value	0.004530689
FWER p-Value	0.047

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EGR3	3	25.122	0.0156	Yes
2	SIN3B	10	20.970	0.0284	Yes
3	LCK	20	19.234	0.0400	Yes
4	TNFRSF1A	22	18.882	0.0518	Yes
5	EGR2	41	16.374	0.0612	Yes
6	LSP1	66	14.430	0.0691	Yes
7	ITCH	73	13.770	0.0775	Yes
8	PPP2CA	93	13.045	0.0847	Yes
9	TAOK2	103	12.848	0.0924	Yes
10	NFKBIA	116	12.486	0.0996	Yes
11	CCM2	133	12.116	0.1065	Yes
12	ARF6	219	10.345	0.1090	Yes
13	GBF1	273	9.723	0.1126	Yes
14	CTDSP2	291	9.575	0.1178	Yes
15	CD4	297	9.537	0.1235	Yes
16	ETS1	300	9.524	0.1294	Yes
17	YWHAZ	325	9.321	0.1341	Yes
18	MEF2D	333	9.231	0.1396	Yes
19	TAOK3	348	9.105	0.1446	Yes
20	DUSP1	351	9.094	0.1502	Yes
21	DAPP1	361	9.005	0.1554	Yes
22	JUNB	376	8.916	0.1604	Yes
23	YWHAE	396	8.835	0.1650	Yes
24	LEF1	400	8.761	0.1703	Yes
25	VAV2	421	8.556	0.1748	Yes
26	PML	463	8.372	0.1781	Yes
27	CDC25B	465	8.370	0.1833	Yes
28	TNFAIP3	474	8.304	0.1881	Yes
29	PIAS4	537	7.975	0.1902	Yes
30	PLCG1	539	7.963	0.1952	Yes
31	EGR1	548	7.925	0.1998	Yes
32	GGA3	552	7.908	0.2046	Yes
33	PRKACA	580	7.756	0.2082	Yes
34	GDI1	620	7.617	0.2111	Yes
35	VAV1	628	7.582	0.2155	Yes
36	RBBP4	662	7.437	0.2187	Yes
37	CTDSP1	666	7.427	0.2232	Yes
38	SRF	686	7.344	0.2269	Yes
39	GADD45B	712	7.204	0.2302	Yes
40	CSNK2A1	727	7.148	0.2340	Yes
41	SMAD7	742	7.089	0.2378	Yes
42	GNAS	780	6.945	0.2405	Yes
43	SKI	813	6.849	0.2433	Yes
44	RAF1	819	6.824	0.2473	Yes
45	LRP6	820	6.815	0.2516	Yes
46	NFATC1	826	6.800	0.2556	Yes
47	CARD11	836	6.773	0.2594	Yes
48	RANBP3	864	6.688	0.2623	Yes
49	CDKN1B	888	6.624	0.2654	Yes
50	RELA	916	6.549	0.2682	Yes
51	MAP3K3	939	6.496	0.2713	Yes
52	PPP3CB	991	6.360	0.2729	Yes
53	TBC1D4	1027	6.281	0.2752	Yes
54	ITK	1091	6.101	0.2761	Yes
55	IKBKG	1106	6.072	0.2792	Yes
56	TSC1	1140	6.004	0.2815	Yes
57	LAMC1	1143	5.991	0.2851	Yes
58	PRNP	1148	5.978	0.2887	Yes
59	BCL2	1151	5.973	0.2923	Yes
60	RUNX1	1167	5.918	0.2953	Yes
61	PPP1CA	1175	5.915	0.2987	Yes
62	NFATC3	1178	5.913	0.3023	Yes
63	PTEN	1189	5.873	0.3055	Yes
64	SYK	1212	5.837	0.3081	Yes
65	CSK	1223	5.821	0.3113	Yes
66	TRAF2	1256	5.730	0.3134	Yes
67	CREB1	1283	5.654	0.3158	Yes
68	TSC2	1289	5.637	0.3190	Yes
69	AKT2	1306	5.599	0.3218	Yes
70	AP2M1	1343	5.518	0.3236	Yes
71	CD79B	1433	5.349	0.3228	Yes
72	NFKB2	1444	5.315	0.3257	Yes
73	NUP214	1449	5.310	0.3288	Yes
74	AES	1469	5.268	0.3312	Yes
75	SNIP1	1470	5.264	0.3345	Yes
76	AXIN1	1475	5.258	0.3376	Yes
77	TGFBR3	1495	5.221	0.3400	Yes
78	FBXW11	1563	5.105	0.3401	Yes
79	FKBP1A	1567	5.097	0.3431	Yes
80	RALB	1578	5.080	0.3458	Yes
81	TLE1	1674	4.931	0.3445	Yes
82	CAMK4	1688	4.913	0.3470	Yes
83	PAG1	1698	4.900	0.3496	Yes
84	CAMK2B	1700	4.893	0.3526	Yes
85	NEDD4L	1825	4.714	0.3498	Yes
86	RELB	1827	4.711	0.3527	Yes
87	EEF2	1841	4.691	0.3551	Yes
88	CBLB	1885	4.615	0.3560	Yes
89	PPP5C	1912	4.582	0.3576	Yes
90	MAP3K14	1956	4.529	0.3585	Yes
91	MAPK3	1966	4.511	0.3609	Yes
92	E2F5	2082	4.371	0.3582	Yes
93	EIF4E	2088	4.365	0.3607	Yes
94	TGFBR1	2098	4.349	0.3631	Yes
95	CDK2	2120	4.313	0.3648	Yes
96	PDPK1	2170	4.258	0.3652	Yes
97	CREBBP	2209	4.217	0.3660	Yes
98	MAPKAP1	2213	4.210	0.3685	Yes
99	MAP3K1	2233	4.194	0.3703	Yes
100	NR4A1	2240	4.181	0.3726	Yes
101	CLTA	2273	4.143	0.3737	Yes
102	FKBP8	2303	4.111	0.3749	Yes
103	RAB5A	2325	4.086	0.3765	Yes
104	MAP2K6	2378	4.033	0.3766	Yes
105	NLK	2430	3.973	0.3767	Yes
106	TGFBR2	2443	3.957	0.3787	Yes
107	RUNX2	2474	3.916	0.3797	Yes
108	JUN	2591	3.817	0.3767	Yes
109	MACF1	2619	3.790	0.3778	Yes
110	DVL1	2689	3.713	0.3770	Yes
111	SHC1	2716	3.694	0.3781	Yes
112	MALT1	2770	3.638	0.3779	Yes
113	BCL10	2773	3.637	0.3801	Yes
114	CTBP1	2795	3.610	0.3813	Yes
115	NCOA1	2802	3.608	0.3833	Yes
116	TIAM1	2834	3.585	0.3841	Yes
117	E2F1	2859	3.556	0.3852	Yes
118	PIK3CA	2870	3.541	0.3870	Yes
119	ATM	2892	3.523	0.3882	Yes
120	MEF2A	2928	3.493	0.3888	Yes
121	PRKDC	2950	3.473	0.3900	Yes
122	MAPKAPK5	2957	3.470	0.3919	Yes
123	NCOR1	2965	3.464	0.3937	Yes
124	GSK3B	2980	3.451	0.3952	Yes
125	CALM3	3006	3.431	0.3962	Yes
126	PTPRC	3046	3.398	0.3965	Yes
127	ATF2	3068	3.373	0.3976	Yes
128	MAPK14	3074	3.368	0.3995	Yes
129	ZAP70	3141	3.317	0.3985	Yes
130	IBTK	3161	3.298	0.3997	Yes
131	PPM1A	3168	3.292	0.4015	Yes
132	CLTB	3192	3.267	0.4025	Yes
133	MAP3K7IP1	3197	3.262	0.4043	Yes
134	DOK1	3306	3.173	0.4013	Yes
135	SLC9A1	3338	3.148	0.4018	Yes
136	RPS6KB1	3354	3.133	0.4031	Yes
137	SOS1	3360	3.127	0.4048	Yes
138	MAP3K4	3381	3.115	0.4058	Yes
139	CBFB	3407	3.097	0.4066	Yes
140	MDM2	3409	3.096	0.4085	Yes
141	ZBTB17	3457	3.057	0.4082	Yes
142	FRAT1	3490	3.026	0.4086	Yes
143	ARF5	3501	3.020	0.4101	Yes
144	ARFGAP1	3521	3.003	0.4111	Yes
145	SKIL	3528	2.998	0.4127	Yes
146	DGKA	3551	2.979	0.4135	Yes
147	PPARGC1A	3592	2.953	0.4135	Yes
148	BAD	3655	2.905	0.4124	Yes
149	SIN3A	3662	2.901	0.4140	Yes
150	ARF1	3666	2.899	0.4156	Yes
151	CAMK2A	3684	2.886	0.4167	Yes
152	PAK1	3703	2.873	0.4176	Yes
153	RPS6KA4	3789	2.811	0.4154	Yes
154	CTLA4	3798	2.805	0.4168	Yes
155	AKT1	3802	2.803	0.4184	Yes
156	UBE2I	3872	2.744	0.4169	No
157	AKT3	3957	2.670	0.4147	No
158	APC	4019	2.635	0.4135	No
159	HBP1	4067	2.607	0.4130	No
160	PKN1	4100	2.590	0.4131	No
161	FURIN	4152	2.546	0.4123	No
162	TBX21	4197	2.508	0.4119	No
163	USF1	4219	2.496	0.4124	No
164	DUSP16	4246	2.472	0.4128	No
165	GADD45A	4293	2.447	0.4122	No
166	ERC1	4304	2.438	0.4132	No
167	NFKBIB	4385	2.393	0.4110	No
168	SMAD3	4422	2.369	0.4108	No
169	PTPN1	4451	2.352	0.4110	No
170	PTPN6	4545	2.295	0.4081	No
171	NUP153	4569	2.279	0.4085	No
172	MAPKAPK3	4580	2.275	0.4094	No
173	BIRC2	4594	2.264	0.4102	No
174	DYNLRB1	4599	2.262	0.4115	No
175	SRC	4632	2.239	0.4114	No
176	HSP90AA1	4681	2.210	0.4105	No
177	ARRB2	4687	2.206	0.4117	No
178	AR	4688	2.205	0.4131	No
179	YES1	4731	2.186	0.4125	No
180	SMAD4	4759	2.167	0.4126	No
181	EP300	4765	2.162	0.4137	No
182	DDIT3	4814	2.141	0.4128	No
183	NR3C1	4826	2.135	0.4136	No
184	ARHGEF7	4847	2.125	0.4140	No
185	RNF111	4856	2.118	0.4150	No
186	ELK1	4900	2.097	0.4143	No
187	HDAC2	4958	2.065	0.4129	No
188	MYOD1	5171	1.940	0.4043	No
189	NCOA2	5268	1.893	0.4010	No
190	SLIT2	5331	1.861	0.3993	No
191	COPA	5347	1.853	0.3998	No
192	SP1	5374	1.845	0.3997	No
193	MAPK11	5462	1.797	0.3968	No
194	PARD6A	5573	1.737	0.3928	No
195	RPS6KA5	5605	1.724	0.3924	No
196	FOXP3	5609	1.722	0.3934	No
197	GSK3A	5701	1.683	0.3902	No
198	CYLD	5710	1.680	0.3909	No
199	PIK3R1	5770	1.654	0.3892	No
200	MAP2K4	5823	1.626	0.3878	No
201	CSF2	5829	1.624	0.3886	No
202	DAXX	5833	1.622	0.3894	No
203	TGIF2	5864	1.609	0.3890	No
204	HNF4A	5912	1.586	0.3879	No
205	BAMBI	5925	1.581	0.3883	No
206	ARHGEF6	6013	1.536	0.3852	No
207	GNG2	6055	1.518	0.3843	No
208	MAP3K7IP2	6233	1.435	0.3769	No
209	SMURF2	6267	1.421	0.3763	No
210	NRAS	6347	1.384	0.3735	No
211	YWHAH	6354	1.382	0.3741	No
212	AP2A1	6415	1.354	0.3721	No
213	BMP4	6472	1.325	0.3704	No
214	PRKCQ	6476	1.323	0.3710	No
215	FYN	6571	1.275	0.3675	No
216	TRAF6	6611	1.253	0.3665	No
217	WNT11	6729	1.203	0.3618	No
218	FOS	6777	1.183	0.3603	No
219	FLT1	6797	1.175	0.3602	No
220	E2F4	6834	1.158	0.3592	No
221	PRKCD	6849	1.149	0.3593	No
222	AXIN2	6861	1.146	0.3595	No
223	OCLN	6864	1.143	0.3601	No
224	FZD6	6878	1.133	0.3602	No
225	DKK1	6889	1.127	0.3605	No
226	ELK4	6913	1.116	0.3601	No
227	CHUK	6991	1.084	0.3572	No
228	MITF	7130	1.025	0.3514	No
229	PIAS3	7246	0.975	0.3467	No
230	PRKCH	7283	0.959	0.3456	No
231	PPP2CB	7344	0.931	0.3434	No
232	CTDSPL	7461	0.884	0.3386	No
233	IL4	7504	0.867	0.3372	No
234	LAMA1	7564	0.843	0.3350	No
235	MAP2K3	7606	0.826	0.3336	No
236	FOSL1	7749	0.760	0.3275	No
237	RHOA	7991	0.666	0.3167	No
238	POU2F1	7999	0.663	0.3168	No
239	PIM1	8068	0.635	0.3140	No
240	PRKAB1	8148	0.596	0.3107	No
241	SAP30	8170	0.588	0.3101	No
242	ZFYVE16	8280	0.546	0.3054	No
243	FOXG1	8513	0.447	0.2949	No
244	ZFYVE9	8535	0.439	0.2942	No
245	WNT4	8968	0.248	0.2743	No
246	STMN1	8975	0.246	0.2742	No
247	PLEKHA1	8993	0.235	0.2735	No
248	REL	9035	0.218	0.2717	No
249	CAV1	9123	0.180	0.2678	No
250	PLA2G2A	9777	-0.119	0.2376	No
251	GPC2	9794	-0.125	0.2369	No
252	MAP3K8	10010	-0.225	0.2271	No
253	PAK2	10297	-0.335	0.2140	No
254	PLA2G4A	10313	-0.343	0.2135	No
255	GSC	10473	-0.396	0.2064	No
256	TH	10486	-0.400	0.2060	No
257	GADD45G	10557	-0.424	0.2031	No
258	SERPINC1	10712	-0.479	0.1962	No
259	PTGS2	10878	-0.540	0.1889	No
260	CD19	10959	-0.570	0.1855	No
261	MKNK1	11007	-0.582	0.1837	No
262	PLD2	11148	-0.637	0.1776	No
263	EGR4	11183	-0.648	0.1764	No
264	CD40LG	11288	-0.678	0.1720	No
265	VDR	11309	-0.685	0.1715	No
266	RPS6	11490	-0.745	0.1636	No
267	CTNNB1	11600	-0.784	0.1591	No
268	NKX2-5	11843	-0.873	0.1484	No
269	BTK	12025	-0.929	0.1405	No
270	BCL3	12040	-0.931	0.1405	No
271	CTGF	12050	-0.935	0.1406	No
272	CD22	12622	-1.103	0.1148	No
273	FZD1	12760	-1.145	0.1092	No
274	FGFR1	12767	-1.146	0.1096	No
275	CITED1	12793	-1.157	0.1092	No
276	GOSR2	12823	-1.165	0.1085	No
277	IRF4	12943	-1.197	0.1038	No
278	FGF2	12961	-1.204	0.1037	No
279	DUSP8	13082	-1.240	0.0989	No
280	IRS1	13166	-1.265	0.0959	No
281	PLEKHA2	13207	-1.276	0.0948	No
282	MAPKAPK2	13256	-1.290	0.0934	No
283	MAP2K1	13318	-1.307	0.0914	No
284	SHH	13338	-1.311	0.0913	No
285	PRKG1	13341	-1.311	0.0920	No
286	MAPK12	13362	-1.319	0.0919	No
287	IL3	13399	-1.333	0.0911	No
288	TNF	13449	-1.346	0.0897	No
289	DKK2	13476	-1.354	0.0893	No
290	AKT1S1	13535	-1.374	0.0875	No
291	AKAP5	13585	-1.389	0.0860	No
292	PRKCZ	13684	-1.423	0.0824	No
293	EIF4G1	14061	-1.526	0.0659	No
294	INSR	14072	-1.529	0.0664	No
295	CASP3	14102	-1.535	0.0660	No
296	HCK	14105	-1.536	0.0669	No
297	MAPK13	14111	-1.538	0.0676	No
298	HDAC1	14343	-1.608	0.0579	No
299	POU2F2	14450	-1.632	0.0540	No
300	MAPK9	14521	-1.654	0.0517	No
301	PPP2R5D	14684	-1.704	0.0453	No
302	CDKN2B	14696	-1.710	0.0458	No
303	CALM2	14820	-1.748	0.0412	No
304	IL10	14877	-1.762	0.0397	No
305	PTCH1	14934	-1.780	0.0382	No
306	CD79A	15127	-1.844	0.0305	No
307	SMAD2	15223	-1.872	0.0272	No
308	MAP3K10	15241	-1.878	0.0276	No
309	MAX	15281	-1.888	0.0270	No
310	KPNA1	15324	-1.901	0.0262	No
311	SNTA1	15423	-1.931	0.0229	No
312	FGF7	15563	-1.987	0.0177	No
313	YAP1	15569	-1.989	0.0187	No
314	RIPK1	15573	-1.990	0.0198	No
315	WIF1	15594	-1.997	0.0201	No
316	SERPINE1	15610	-2.003	0.0207	No
317	ETV1	15743	-2.044	0.0158	No
318	ARFIP2	15859	-2.082	0.0118	No
319	BLNK	15915	-2.099	0.0105	No
320	RALA	16079	-2.146	0.0043	No
321	PRKCE	16103	-2.152	0.0046	No
322	ESR1	16252	-2.203	-0.0009	No
323	CASP9	16271	-2.209	-0.0004	No
324	CCND1	16273	-2.210	0.0010	No
325	MDK	16296	-2.218	0.0013	No
326	ATF1	16376	-2.241	-0.0009	No
327	IFNG	16549	-2.307	-0.0075	No
328	ATF6	16619	-2.329	-0.0092	No
329	RAP1A	16633	-2.333	-0.0084	No
330	FZD3	16651	-2.337	-0.0077	No
331	RASA1	16898	-2.430	-0.0176	No
332	RHEB	16939	-2.445	-0.0179	No
333	RIPK2	16962	-2.453	-0.0174	No
334	FASLG	17031	-2.476	-0.0190	No
335	DAB2	17069	-2.489	-0.0192	No
336	MEF2C	17220	-2.542	-0.0246	No
337	TCF3	17265	-2.559	-0.0250	No
338	WNT5A	17341	-2.593	-0.0269	No
339	IFNB1	17366	-2.603	-0.0264	No
340	FOXH1	17476	-2.639	-0.0298	No
341	GPC3	17497	-2.647	-0.0290	No
342	SLC2A4	17567	-2.667	-0.0306	No
343	CD72	17655	-2.708	-0.0329	No
344	RUNX3	17688	-2.722	-0.0327	No
345	TDGF1	17737	-2.744	-0.0332	No
346	SFN	18116	-2.905	-0.0490	No
347	EIF4EBP1	18133	-2.908	-0.0479	No
348	HRAS	18182	-2.929	-0.0483	No
349	TCF4	18239	-2.951	-0.0490	No
350	CDKN1A	18276	-2.964	-0.0489	No
351	GNB1	18351	-3.002	-0.0504	No
352	NRG1	18440	-3.046	-0.0526	No
353	MAF	18485	-3.064	-0.0527	No
354	ITGB5	18507	-3.077	-0.0518	No
355	ATF3	18527	-3.087	-0.0507	No
356	SLC3A2	18581	-3.111	-0.0512	No
357	PPP3CA	18699	-3.178	-0.0547	No
358	MAP3K7	18867	-3.272	-0.0604	No
359	RNF128	18899	-3.297	-0.0598	No
360	CALM1	18993	-3.349	-0.0620	No
361	KPNB1	19033	-3.372	-0.0617	No
362	PDE3B	19067	-3.392	-0.0611	No
363	CDKN2A	19143	-3.446	-0.0624	No
364	CDC42	19144	-3.447	-0.0603	No
365	MAPK8	19156	-3.453	-0.0586	No
366	PPARG	19187	-3.475	-0.0579	No
367	HSPB1	19199	-3.479	-0.0562	No
368	XPO1	19211	-3.485	-0.0545	No
369	DACT2	19225	-3.494	-0.0529	No
370	PAK3	19253	-3.511	-0.0520	No
371	DCP1A	19258	-3.513	-0.0500	No
372	YWHAB	19433	-3.637	-0.0558	No
373	WNT1	19449	-3.646	-0.0542	No
374	MAP3K6	19547	-3.725	-0.0564	No
375	NFATC2	19548	-3.725	-0.0540	No
376	IKBKB	19586	-3.755	-0.0534	No
377	DLX1	19783	-3.932	-0.0601	No
378	MAP3K12	19825	-3.968	-0.0595	No
379	IL2RA	19843	-3.987	-0.0578	No
380	INPPL1	19844	-3.988	-0.0553	No
381	PLCG2	19865	-4.009	-0.0537	No
382	GATA3	19901	-4.038	-0.0528	No
383	WWP1	19929	-4.061	-0.0515	No
384	EIF2A	19981	-4.109	-0.0513	No
385	FGR	20050	-4.194	-0.0518	No
386	EIF4A1	20054	-4.197	-0.0494	No
387	UBE2D3	20226	-4.387	-0.0546	No
388	KRAS	20270	-4.421	-0.0538	No
389	RBBP7	20378	-4.547	-0.0559	No
390	RAC1	20404	-4.590	-0.0542	No
391	MAPK1	20477	-4.696	-0.0546	No
392	PTPRK	20543	-4.769	-0.0546	No
393	YWHAG	20590	-4.829	-0.0538	No
394	COL1A2	20600	-4.839	-0.0512	No
395	SH3BP5	20626	-4.874	-0.0493	No
396	APP	20670	-4.957	-0.0482	No
397	EEF2K	20806	-5.202	-0.0512	No
398	GRB2	20842	-5.251	-0.0495	No
399	DUSP10	20883	-5.300	-0.0481	No
400	FRAP1	20899	-5.323	-0.0454	No
401	BLK	20922	-5.356	-0.0431	No
402	CDK4	21020	-5.528	-0.0441	No
403	WNT6	21037	-5.570	-0.0414	No
404	RBL1	21082	-5.671	-0.0399	No
405	YWHAQ	21137	-5.795	-0.0388	No
406	RAN	21154	-5.842	-0.0359	No
407	STRAP	21183	-5.910	-0.0335	No
408	NFKB1	21220	-6.043	-0.0314	No
409	CAMK2G	21269	-6.196	-0.0297	No
410	TP53	21287	-6.255	-0.0266	No
411	PRKCA	21377	-6.512	-0.0266	No
412	PPP3CC	21439	-6.721	-0.0253	No
413	FCGR2B	21564	-7.183	-0.0265	No
414	CSNK1A1	21599	-7.335	-0.0235	No
415	GPC1	21626	-7.533	-0.0200	No
416	MYC	21865	-10.792	-0.0243	No
417	CEBPB	21876	-11.074	-0.0179	No
418	SAP18	21894	-11.820	-0.0113	No
419	IL5	21945	-21.856	0.0001	No